3D structure

PDB id
4V5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGCGAAGACAGCCAGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAAUAGCUCACUGGUCGAGUGG
Length
75 nucleotides
Bulged bases
4V5G|1|BA|A|1046, 4V5G|1|BA|U|1066
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5G|1|BA|C|1041
4V5G|1|BA|G|1042
4V5G|1|BA|C|1043
4V5G|1|BA|G|1044
4V5G|1|BA|A|1045
4V5G|1|BA|A|1046
4V5G|1|BA|G|1047
4V5G|1|BA|A|1048
4V5G|1|BA|C|1049
4V5G|1|BA|A|1050
4V5G|1|BA|G|1051
4V5G|1|BA|C|1052
4V5G|1|BA|C|1053
4V5G|1|BA|A|1054
4V5G|1|BA|G|1055
4V5G|1|BA|G|1056
4V5G|1|BA|A|1057
4V5G|1|BA|G|1058
4V5G|1|BA|G|1059
4V5G|1|BA|U|1060
4V5G|1|BA|U|1061
4V5G|1|BA|G|1062
4V5G|1|BA|G|1063
4V5G|1|BA|C|1064
4V5G|1|BA|U|1065
4V5G|1|BA|U|1066
4V5G|1|BA|A|1067
4V5G|1|BA|G|1068
4V5G|1|BA|A|1069
4V5G|1|BA|A|1070
4V5G|1|BA|G|1071
4V5G|1|BA|C|1072
4V5G|1|BA|A|1073
4V5G|1|BA|G|1074
4V5G|1|BA|C|1075
4V5G|1|BA|C|1076
4V5G|1|BA|A|1077
4V5G|1|BA|U|1078
4V5G|1|BA|C|1079
4V5G|1|BA|C|1080
4V5G|1|BA|U|1081
4V5G|1|BA|U|1082
4V5G|1|BA|U|1083
4V5G|1|BA|A|1084
4V5G|1|BA|A|1085
4V5G|1|BA|A|1086
4V5G|1|BA|G|1087
4V5G|1|BA|A|1088
4V5G|1|BA|G|1089
4V5G|1|BA|U|1090
4V5G|1|BA|G|1091
4V5G|1|BA|C|1092
4V5G|1|BA|G|1093
4V5G|1|BA|U|1094
4V5G|1|BA|A|1095
4V5G|1|BA|A|1096
4V5G|1|BA|U|1097
4V5G|1|BA|A|1098
4V5G|1|BA|G|1099
4V5G|1|BA|C|1100
4V5G|1|BA|U|1101
4V5G|1|BA|C|1102
4V5G|1|BA|A|1103
4V5G|1|BA|C|1104
4V5G|1|BA|U|1105
4V5G|1|BA|G|1106
4V5G|1|BA|G|1107
4V5G|1|BA|U|1108
4V5G|1|BA|C|1109
4V5G|1|BA|G|1110
4V5G|1|BA|A|1111
4V5G|1|BA|G|1112
4V5G|1|BA|U|1113
4V5G|1|BA|G|1114
4V5G|1|BA|G|1115

Current chains

Chain BA
23S RIBOSOMAL RNA

Nearby chains

Chain AY
Transfer RNA; tRNA
Chain B9
50S RIBOSOMAL PROTEIN L36
Chain BH
50S RIBOSOMAL PROTEIN L6
Chain BJ
50S RIBOSOMAL PROTEIN L10
Chain BK
50S RIBOSOMAL PROTEIN L11
Chain BQ
50S RIBOSOMAL PROTEIN L16
Chain BZ
50S RIBOSOMAL PROTEIN L25

Coloring options:

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