HL_4V5J_050
3D structure
- PDB id
- 4V5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 4V5J|1|BA|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5J_050 not in the Motif Atlas
- Homologous match to HL_7RQB_013
- Geometric discrepancy: 0.0732
- The information below is about HL_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V5J|1|BA|G|382
4V5J|1|BA|U|383
4V5J|1|BA|U|384
4V5J|1|BA|C|385
4V5J|1|BA|G|386
4V5J|1|BA|U|387
4V5J|1|BA|G|388
4V5J|1|BA|G|389
4V5J|1|BA|A|390
4V5J|1|BA|G|391
4V5J|1|BA|C|392
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B1
- 50S RIBOSOMAL PROTEIN L28
- Chain BP
- 50S RIBOSOMAL PROTEIN L15
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