HL_4V5J_134

3D structure

PDB id

4V5J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCAGCGGUUCGGCCGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5J|1|CA|C|1128
4V5J|1|CA|C|1129
4V5J|1|CA|A|1130
4V5J|1|CA|G|1131
4V5J|1|CA|C|1132
4V5J|1|CA|G|1133
4V5J|1|CA|G|1134
4V5J|1|CA|U|1135
4V5J|1|CA|U|1136
4V5J|1|CA|C|1137
4V5J|1|CA|G|1138
4V5J|1|CA|G|1139
4V5J|1|CA|C|1140
4V5J|1|CA|C|1141
4V5J|1|CA|G|1142
4V5J|1|CA|G|1143

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CI

30S RIBOSOMAL PROTEIN S9