HL_4V5J_199
3D structure
- PDB id
- 4V5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 4V5J|1|DA|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5J_199 not in the Motif Atlas
- Homologous match to HL_7RQB_053
- Geometric discrepancy: 0.0798
- The information below is about HL_7RQB_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5J|1|DA|C|2248
4V5J|1|DA|U|2249
4V5J|1|DA|G|2250
4V5J|1|DA|G|2251
4V5J|1|DA|G|2252
4V5J|1|DA|G|2253
4V5J|1|DA|C|2254
4V5J|1|DA|G|2255
4V5J|1|DA|G|2256
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain CV
- Transfer RNA; tRNA
- Chain CY
- PEPTIDE CHAIN RELEASE FACTOR 2
- Chain D0
- 50S RIBOSOMAL PROTEIN L27
- Chain DQ
- 50S RIBOSOMAL PROTEIN L16
Coloring options: