HL_4V5J_232

3D structure

PDB id

4V5J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUCGUGGAG

Length

9 nucleotides

Bulged bases

4V5J|1|DA|G|386, 4V5J|1|DA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5J|1|DA|U|383
4V5J|1|DA|U|384
4V5J|1|DA|C|385
4V5J|1|DA|G|386
4V5J|1|DA|U|387
4V5J|1|DA|G|388
4V5J|1|DA|G|389
4V5J|1|DA|A|390
4V5J|1|DA|G|391

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain CW

Transfer RNA; tRNA

Chain D1

50S RIBOSOMAL PROTEIN L28

Chain DP

50S RIBOSOMAL PROTEIN L15