HL_4V5K_065

3D structure

PDB id

4V5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAGACAGCCAGUCGAG

Length

18 nucleotides

Bulged bases

4V5K|1|BA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5K|1|BA|C|1043
4V5K|1|BA|G|1044
4V5K|1|BA|A|1045
4V5K|1|BA|A|1046
4V5K|1|BA|G|1047
4V5K|1|BA|A|1048
4V5K|1|BA|C|1049
4V5K|1|BA|A|1050
4V5K|1|BA|G|1051
4V5K|1|BA|C|1052
4V5K|1|BA|C|1053
4V5K|1|BA|A|1106
4V5K|1|BA|G|1107
4V5K|1|BA|U|1108
4V5K|1|BA|C|1109
4V5K|1|BA|G|1110
4V5K|1|BA|A|1111
4V5K|1|BA|G|1112

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BH

50S RIBOSOMAL PROTEIN L6

Chain BJ

50S RIBOSOMAL PROTEIN L10