HL_4V5K_087

3D structure

PDB id

4V5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCCCGCCUCCGGGUGGGG

Length

18 nucleotides

Bulged bases

4V5K|1|BA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5K|1|BA|C|2137
4V5K|1|BA|C|2138
4V5K|1|BA|C|2139
4V5K|1|BA|C|2140
4V5K|1|BA|G|2141
4V5K|1|BA|C|2142
4V5K|1|BA|C|2143
4V5K|1|BA|U|2144
4V5K|1|BA|C|2145
4V5K|1|BA|C|2146
4V5K|1|BA|G|2147
4V5K|1|BA|G|2148
4V5K|1|BA|G|2149
4V5K|1|BA|U|2150
4V5K|1|BA|G|2151
4V5K|1|BA|G|2152
4V5K|1|BA|G|2153
4V5K|1|BA|G|2154

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S RIBOSOMAL PROTEIN S11