HL_4V5L_018

3D structure

PDB id

4V5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4V5L|1|AA|U|841

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5L_018 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.4891

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V5L|1|AA|G|837
4V5L|1|AA|G|838
4V5L|1|AA|U|839
4V5L|1|AA|C|840
4V5L|1|AA|U|841
4V5L|1|AA|C|848
4V5L|1|AA|C|849

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AB

30S RIBOSOMAL PROTEIN S2

Chain AR

30S RIBOSOMAL PROTEIN S18