HL_4V5L_057

3D structure

PDB id

4V5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5L_057 not in the Motif Atlas

Geometric match to HL_3SUX_002

Geometric discrepancy: 0.2019

The information below is about HL_3SUX_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

4V5L|1|BA|C|543
4V5L|1|BA|G|544
4V5L|1|BA|C|545
4V5L|1|BA|A|547
4V5L|1|BA|A|548
4V5L|1|BA|G|549

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BN

50S RIBOSOMAL PROTEIN L13

Chain BV

50S RIBOSOMAL PROTEIN L21