HL_4V5L_062

3D structure

PDB id

4V5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGCACGCG

Length

8 nucleotides

Bulged bases

4V5L|1|BA|C|654|||I, 4V5L|1|BA|C|654|||K

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5L_062 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.3571

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V5L|1|BA|C|654|||G
4V5L|1|BA|G|654|||H
4V5L|1|BA|C|654|||I
4V5L|1|BA|A|654|||J
4V5L|1|BA|C|654|||K
4V5L|1|BA|G|654|||L
4V5L|1|BA|C|654|||M
4V5L|1|BA|G|654|||N

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains