HL_4V5L_077
3D structure
- PDB id
- 4V5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAUGGACGAG
- Length
- 11 nucleotides
- Bulged bases
- 4V5L|1|BA|U|1453, 4V5L|1|BA|A|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5L_077 not in the Motif Atlas
- Homologous match to HL_7A0S_036
- Geometric discrepancy: 0.5104
- The information below is about HL_7A0S_036
- Detailed Annotation
- Pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- HL_00824.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V5L|1|BA|C|1450|||A
4V5L|1|BA|C|1451
4V5L|1|BA|A|1452
4V5L|1|BA|U|1453
4V5L|1|BA|G|1455
4V5L|1|BA|G|1456
4V5L|1|BA|A|1457
4V5L|1|BA|C|1458
4V5L|1|BA|G|1459
4V5L|1|BA|A|1460
4V5L|1|BA|G|1461
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BR
- 50S RIBOSOMAL PROTEIN L17
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