HL_4V5P_066

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGCCCACCAGCCU

Length

14 nucleotides

Bulged bases

4V5P|1|BA|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|BA|G|881
4V5P|1|BA|G|882
4V5P|1|BA|G|883
4V5P|1|BA|C|884
4V5P|1|BA|C|885
4V5P|1|BA|C|886
4V5P|1|BA|A|887
4V5P|1|BA|C|888
4V5P|1|BA|C|889
4V5P|1|BA|A|890
4V5P|1|BA|G|892
4V5P|1|BA|C|893
4V5P|1|BA|C|894
4V5P|1|BA|U|895

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AM

30S RIBOSOMAL PROTEIN S13

Chain AS

30S RIBOSOMAL PROTEIN S19

Chain BZ

50S RIBOSOMAL PROTEIN L25