HL_4V5P_187

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAGCCAUGGACGAGCC

Length

16 nucleotides

Bulged bases

4V5P|1|DA|U|1453, 4V5P|1|DA|A|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|DA|G|1448
4V5P|1|DA|A|1449
4V5P|1|DA|G|1450
4V5P|1|DA|C|1450|||A
4V5P|1|DA|C|1451
4V5P|1|DA|A|1452
4V5P|1|DA|U|1453
4V5P|1|DA|G|1455
4V5P|1|DA|G|1456
4V5P|1|DA|A|1457
4V5P|1|DA|C|1458
4V5P|1|DA|G|1459
4V5P|1|DA|A|1460
4V5P|1|DA|G|1461
4V5P|1|DA|C|1462
4V5P|1|DA|C|1463

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain DR

50S RIBOSOMAL PROTEIN L17