HL_4V5Q_031
3D structure
- PDB id
- 4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5Q_031 not in the Motif Atlas
- Homologous match to HL_4LFB_032
- Geometric discrepancy: 0.1072
- The information below is about HL_4LFB_032
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
4V5Q|1|AA|C|1515
4V5Q|1|AA|G|1516
4V5Q|1|AA|G|1517
4V5Q|1|AA|A|1518
4V5Q|1|AA|A|1519
4V5Q|1|AA|G|1520
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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