HL_4V5Q_157

3D structure

PDB id

4V5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

4V5Q|1|DA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5Q|1|DA|G|188
4V5Q|1|DA|G|189
4V5Q|1|DA|A|190
4V5Q|1|DA|A|191
4V5Q|1|DA|C|192
4V5Q|1|DA|U|193
4V5Q|1|DA|G|194
4V5Q|1|DA|A|195
4V5Q|1|DA|A|196
4V5Q|1|DA|A|197
4V5Q|1|DA|C|198
4V5Q|1|DA|A|199
4V5Q|1|DA|U|200
4V5Q|1|DA|C|201
4V5Q|1|DA|U|202
4V5Q|1|DA|C|203
4V5Q|1|DA|A|204
4V5Q|1|DA|G|205
4V5Q|1|DA|U|206
4V5Q|1|DA|A|207
4V5Q|1|DA|C|208

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain D1

50S RIBOSOMAL PROTEIN L28

Chain D7

50S RIBOSOMAL PROTEIN L34

Chain D8

50S RIBOSOMAL PROTEIN L35

Chain DP

50S RIBOSOMAL PROTEIN L15