HL_4V5R_069

3D structure

PDB id

4V5R (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AGGUUGGCUUAGAAGCAGCCAUCCU

Length

25 nucleotides

Bulged bases

4V5R|1|BA|U|1061, 4V5R|1|BA|U|1066, 4V5R|1|BA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5R|1|BA|A|1057
4V5R|1|BA|G|1058
4V5R|1|BA|G|1059
4V5R|1|BA|U|1060
4V5R|1|BA|U|1061
4V5R|1|BA|G|1062
4V5R|1|BA|G|1063
4V5R|1|BA|C|1064
4V5R|1|BA|U|1065
4V5R|1|BA|U|1066
4V5R|1|BA|A|1067
4V5R|1|BA|G|1068
4V5R|1|BA|A|1069
4V5R|1|BA|A|1070
4V5R|1|BA|G|1071
4V5R|1|BA|C|1072
4V5R|1|BA|A|1073
4V5R|1|BA|G|1074
4V5R|1|BA|C|1075
4V5R|1|BA|C|1076
4V5R|1|BA|A|1077
4V5R|1|BA|U|1078
4V5R|1|BA|C|1079
4V5R|1|BA|C|1080
4V5R|1|BA|U|1081

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AY

Transfer RNA; tRNA

Chain BJ

50S RIBOSOMAL PROTEIN L10

Chain BK

50S RIBOSOMAL PROTEIN L11

Chain BQ

50S RIBOSOMAL PROTEIN L16

Chain BZ

50S RIBOSOMAL PROTEIN L25