HL_4V5R_141

3D structure

PDB id

4V5R (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5R_141 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.3913

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

4V5R|1|CA|C|1445
4V5R|1|CA|U|1446
4V5R|1|CA|A|1447
4V5R|1|CA|C|1452
4V5R|1|CA|G|1456
4V5R|1|CA|G|1457

Current chains

Chain CA

16S RRNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20