HL_4V5S_120

3D structure

PDB id

4V5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4V5S|1|CA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5S_120 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.2411

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V5S|1|CA|C|342
4V5S|1|CA|U|343
4V5S|1|CA|A|344
4V5S|1|CA|C|345
4V5S|1|CA|G|346
4V5S|1|CA|G|347

Current chains

Chain CA

16S RRNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain DO

50S RIBOSOMAL PROTEIN L14

Chain DT

50S RIBOSOMAL PROTEIN L19