HL_4V5S_222
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 4V5S|1|DB|U|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5S_222 not in the Motif Atlas
- Geometric match to HL_7RQB_070
- Geometric discrepancy: 0.1315
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V5S|1|DB|C|38
4V5S|1|DB|A|39
4V5S|1|DB|U|40
4V5S|1|DB|U|41
4V5S|1|DB|C|42
4V5S|1|DB|C|43
4V5S|1|DB|G|44
Current chains
- Chain DB
- 5S RIBOSOMAL RNA
Nearby chains
- Chain D4
- 50S RIBOSOMAL PROTEIN L31
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DG
- 50S RIBOSOMAL PROTEIN L5
- Chain DS
- 50S RIBOSOMAL PROTEIN L18
Coloring options: