HL_4V5S_254
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4V5S|1|BA|G|329, 4V5S|1|BA|A|330, 4V5S|1|BA|A|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5S_254 not in the Motif Atlas
- Homologous match to HL_9DFE_011
- Geometric discrepancy: 0.1764
- The information below is about HL_9DFE_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
4V5S|1|BA|G|327
4V5S|1|BA|U|328
4V5S|1|BA|G|329
4V5S|1|BA|A|330
4V5S|1|BA|A|331
4V5S|1|BA|A|332
4V5S|1|BA|G|333
4V5S|1|BA|C|334
4V5S|1|BA|C|335
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BF
- 50S RIBOSOMAL PROTEIN L4
- Chain BY
- 50S RIBOSOMAL PROTEIN L24
Coloring options: