HL_4V63_050

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

4V63|1|BA|G|321, 4V63|1|BA|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V63_050 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.1258

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V63|1|BA|C|319
4V63|1|BA|A|320
4V63|1|BA|G|321
4V63|1|BA|A|322
4V63|1|BA|G|323

Current chains

Chain BA

23S RRNA

Nearby chains

Chain BF

50S ribosomal protein L4