HL_4V63_124

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

CGAGGAG

Length

7 nucleotides

Bulged bases

4V63|1|CA|G|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V63_124 not in the Motif Atlas

Homologous match to HL_6CZR_083

Geometric discrepancy: 0.2213

The information below is about HL_6CZR_083

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4V63|1|CA|C|458
4V63|1|CA|G|464
4V63|1|CA|A|465
4V63|1|CA|G|466
4V63|1|CA|G|467
4V63|1|CA|A|468
4V63|1|CA|G|474

Current chains

Chain CA

16S RRNA

Nearby chains

Chain CP

30S ribosomal protein S16