HL_4V63_155

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

CUUUCUUG

Length

8 nucleotides

Bulged bases

4V63|1|DA|C|163|||B

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V63_155 not in the Motif Atlas

Homologous match to HL_7A0S_005

Geometric discrepancy: 0.4723

The information below is about HL_7A0S_005

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

4V63|1|DA|C|155
4V63|1|DA|U|161
4V63|1|DA|U|162
4V63|1|DA|U|163
4V63|1|DA|C|163|||B
4V63|1|DA|U|164
4V63|1|DA|U|165
4V63|1|DA|G|171

Current chains

Chain DA

23S RRNA

Nearby chains

Chain D1

50S ribosomal protein L28