HL_4V64_085

3D structure

PDB id

4V64 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

4V64|1|BB|C|2145, 4V64|1|BB|A|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V64|1|BB|A|2142
4V64|1|BB|C|2143
4V64|1|BB|G|2144
4V64|1|BB|C|2145
4V64|1|BB|C|2146
4V64|1|BB|A|2147
4V64|1|BB|G|2148
4V64|1|BB|U|2149

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA