HL_4V64_102
3D structure
- PDB id
- 4V64 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 4V64|1|BB|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V64_102 not in the Motif Atlas
- Homologous match to HL_5J7L_201
- Geometric discrepancy: 0.1362
- The information below is about HL_5J7L_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V64|1|BB|G|2819
4V64|1|BB|A|2820
4V64|1|BB|A|2821
4V64|1|BB|G|2822
4V64|1|BB|A|2823
4V64|1|BB|C|2824
4V64|1|BB|G|2825
4V64|1|BB|A|2826
4V64|1|BB|C|2827
Current chains
- Chain BB
- 23S ribosomal RNA
Nearby chains
- Chain BD
- 50S ribosomal protein L3
- Chain BN
- 50S ribosomal protein L17
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