HL_4V67_014

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_014 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2959

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V67|1|AA|C|522
4V67|1|AA|A|523
4V67|1|AA|G|524
4V67|1|AA|C|525
4V67|1|AA|C|526
4V67|1|AA|G|527

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AV

MRNA