HL_4V67_100

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_100 not in the Motif Atlas

Homologous match to HL_7RQB_060

Geometric discrepancy: 0.2986

The information below is about HL_7RQB_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V67|1|BA|C|2471
4V67|1|BA|G|2472
4V67|1|BA|U|2473
4V67|1|BA|C|2474
4V67|1|BA|C|2475
4V67|1|BA|A|2476
4V67|1|BA|C|2477
4V67|1|BA|A|2478
4V67|1|BA|G|2479

Current chains

Chain BA

23S RRNA

Nearby chains

Chain AX

Bacterial peptide chain release factor 2 (RF-2)