HL_4V67_155

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUUCUUG

Length

8 nucleotides

Bulged bases

4V67|1|DA|C|163|||B

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_155 not in the Motif Atlas

Geometric match to HL_7A0S_039

Geometric discrepancy: 0.2822

The information below is about HL_7A0S_039

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V67|1|DA|C|155
4V67|1|DA|U|161
4V67|1|DA|U|162
4V67|1|DA|U|163
4V67|1|DA|C|163|||B
4V67|1|DA|U|164
4V67|1|DA|U|165
4V67|1|DA|G|171

Current chains

Chain DA

23S RRNA

Nearby chains

Chain D1

50S ribosomal protein L28