HL_4V67_176

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_176 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.3222

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

4V67|1|DA|C|884
4V67|1|DA|C|885
4V67|1|DA|C|886
4V67|1|DA|A|887
4V67|1|DA|C|888
4V67|1|DA|C|889
4V67|1|DA|A|890
4V67|1|DA|G|892

Current chains

Chain DA

23S RRNA

Nearby chains

Chain CM

30S ribosomal protein S13

Chain CS

30S ribosomal protein S19