HL_4V67_182

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_182 not in the Motif Atlas

Geometric match to HL_4V9F_017

Geometric discrepancy: 0.1014

The information below is about HL_4V9F_017

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V67|1|DA|C|1222
4V67|1|DA|G|1223
4V67|1|DA|C|1224
4V67|1|DA|G|1225
4V67|1|DA|A|1226
4V67|1|DA|G|1227

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DU

50S ribosomal protein L20

Chain DV

50S ribosomal protein L21