HL_4V67_210

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

4V67|1|DA|U|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V67_210 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.1014

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

4V67|1|DA|C|2404
4V67|1|DA|G|2405
4V67|1|DA|U|2406
4V67|1|DA|G|2407
4V67|1|DA|U|2408
4V67|1|DA|G|2409
4V67|1|DA|G|2410
4V67|1|DA|A|2411
4V67|1|DA|A|2412
4V67|1|DA|G|2413

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DP

50S ribosomal protein L15