HL_4V6A_100

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGCGUCAAGCC

Length

11 nucleotides

Bulged bases

4V6A|1|BA|U|2796, 4V6A|1|BA|C|2799

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6A_100 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2672

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V6A|1|BA|G|2792
4V6A|1|BA|G|2793
4V6A|1|BA|C|2794
4V6A|1|BA|G|2795
4V6A|1|BA|U|2796
4V6A|1|BA|C|2799
4V6A|1|BA|A|2801
4V6A|1|BA|A|2801|||A
4V6A|1|BA|G|2802
4V6A|1|BA|C|2803
4V6A|1|BA|C|2804

Current chains

Chain BA

23S ribosomal RNA

Nearby chains