HL_4V6A_116

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4V6A|1|CA|C|470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6A_116 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.2564

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V6A|1|CA|C|458
4V6A|1|CA|G|460
4V6A|1|CA|A|461
4V6A|1|CA|C|470
4V6A|1|CA|G|471
4V6A|1|CA|A|472
4V6A|1|CA|G|473

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CP

30S ribosomal protein S16