HL_4V6A_167

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCCGCGAAGACAGCCGGUCGAGUGGC

Length

26 nucleotides

Bulged bases

4V6A|1|DA|C|1043, 4V6A|1|DA|A|1046, 4V6A|1|DA|A|1111

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|DA|G|1039
4V6A|1|DA|C|1040
4V6A|1|DA|C|1041
4V6A|1|DA|G|1042
4V6A|1|DA|C|1043
4V6A|1|DA|G|1044
4V6A|1|DA|A|1045
4V6A|1|DA|A|1046
4V6A|1|DA|G|1047
4V6A|1|DA|A|1048
4V6A|1|DA|C|1049
4V6A|1|DA|A|1050
4V6A|1|DA|G|1051
4V6A|1|DA|C|1052
4V6A|1|DA|C|1053
4V6A|1|DA|G|1106
4V6A|1|DA|G|1107
4V6A|1|DA|U|1108
4V6A|1|DA|C|1109
4V6A|1|DA|G|1110
4V6A|1|DA|A|1111
4V6A|1|DA|G|1112
4V6A|1|DA|U|1113
4V6A|1|DA|G|1114
4V6A|1|DA|G|1115
4V6A|1|DA|C|1116

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D9

50S ribosomal protein L36

Chain DH

50S ribosomal protein L6

Chain DQ

50S ribosomal protein L16

Chain DZ

50S ribosomal protein L25