HL_4V6A_168

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

4V6A|1|DA|A|1174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6A_168 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3245

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_05426.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V6A|1|DA|G|1170
4V6A|1|DA|G|1171
4V6A|1|DA|G|1173
4V6A|1|DA|A|1174
4V6A|1|DA|U|1175
4V6A|1|DA|G|1176
4V6A|1|DA|A|1177
4V6A|1|DA|C|1178
4V6A|1|DA|C|1179

Current chains

Chain DA

23S ribosomal RNA

Nearby chains