HL_4V6C_097

3D structure

PDB id

4V6C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6C_097 not in the Motif Atlas

Homologous match to HL_5J7L_198

Geometric discrepancy: 0.0756

The information below is about HL_5J7L_198

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

4V6C|1|BA|U|2701
4V6C|1|BA|G|2702
4V6C|1|BA|C|2703
4V6C|1|BA|C|2704
4V6C|1|BA|A|2705
4V6C|1|BA|A|2706

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L17