HL_4V6D_137
3D structure
- PDB id
- 4V6D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.81 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59710.2
- Basepair signature
- cWW-bif-R-R-R-R-R
- Number of instances in this motif group
- 31
Unit IDs
4V6D|1|CV|G|31
4V6D|1|CV|C|32
4V6D|1|CV|U|33
4V6D|1|CV|C|34
4V6D|1|CV|A|35
4V6D|1|CV|U|36
4V6D|1|CV|A|37
4V6D|1|CV|A|38
4V6D|1|CV|C|39
Current chains
- Chain CV
- P-site tRNA ASL fragment
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CI
- 30S ribosomal protein S9
- Chain CW
- messenger RNA
Coloring options: