HL_4V6E_108

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V6E|1|CA|U|209, 4V6E|1|CA|G|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6E_108 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.5543

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V6E|1|CA|C|207
4V6E|1|CA|U|208
4V6E|1|CA|U|209
4V6E|1|CA|C|210
4V6E|1|CA|G|211
4V6E|1|CA|G|212

Current chains

Chain CA

16S rRNA

Nearby chains