HL_4V6F_006

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V6F|1|AA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_006 not in the Motif Atlas

Homologous match to HL_7RQB_006

Geometric discrepancy: 0.1182

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V6F|1|AA|G|194
4V6F|1|AA|A|195
4V6F|1|AA|A|196
4V6F|1|AA|A|197
4V6F|1|AA|C|198
4V6F|1|AA|A|199
4V6F|1|AA|U|200
4V6F|1|AA|C|201

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain AO

50S RIBOSOMAL PROTEIN L15

Chain AZ

50S RIBOSOMAL PROTEIN L28