HL_4V6F_081

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_081 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1364

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V6F|1|BA|C|320
4V6F|1|BA|A|321
4V6F|1|BA|C|322
4V6F|1|BA|U|323
4V6F|1|BA|G|324
4V6F|1|BA|A|325
4V6F|1|BA|G|326
4V6F|1|BA|A|327
4V6F|1|BA|C|328
4V6F|1|BA|A|329
4V6F|1|BA|C|330
4V6F|1|BA|G|331
4V6F|1|BA|G|332
4V6F|1|BA|G|333

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BS

30S ribosomal protein S16

Chain BW

30S ribosomal protein S20