HL_4V6F_123

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4V6F|1|CA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_123 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.3455

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

4V6F|1|CA|C|342
4V6F|1|CA|U|343
4V6F|1|CA|A|344
4V6F|1|CA|C|345
4V6F|1|CA|G|346
4V6F|1|CA|G|347

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CW

30S ribosomal protein S20

Chain DN

50S RIBOSOMAL PROTEIN L14

Chain DR

50S RIBOSOMAL PROTEIN L19