HL_4V6F_160

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUUUUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_160 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3706

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V6F|1|DA|C|155
4V6F|1|DA|U|161
4V6F|1|DA|U|162
4V6F|1|DA|U|163
4V6F|1|DA|U|164
4V6F|1|DA|U|165
4V6F|1|DA|G|171

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DZ

50S RIBOSOMAL PROTEIN L28