HL_4V6F_187

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

4V6F|1|DA|A|1095, 4V6F|1|DA|A|1096

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_187 not in the Motif Atlas

Homologous match to HL_9DFE_028

Geometric discrepancy: 0.5901

The information below is about HL_9DFE_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6F|1|DA|C|1092
4V6F|1|DA|G|1093
4V6F|1|DA|U|1094
4V6F|1|DA|A|1095
4V6F|1|DA|A|1096
4V6F|1|DA|U|1097
4V6F|1|DA|A|1098
4V6F|1|DA|G|1099

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DH

50S RIBOSOMAL PROTEIN L6

Chain DL

50S ribosomal protein L11