HL_4V6G_011

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V6G|1|AA|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6G_011 not in the Motif Atlas

Homologous match to HL_6CZR_082

Geometric discrepancy: 0.2348

The information below is about HL_6CZR_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

4V6G|1|AA|C|419
4V6G|1|AA|U|420
4V6G|1|AA|U|421
4V6G|1|AA|C|422
4V6G|1|AA|G|423
4V6G|1|AA|G|424

Current chains

Chain AA

16S RRNA (E.COLI NUMBERING)

Nearby chains

Chain AF

30S RIBOSOMAL PROTEIN S3

Chain AG

30S RIBOSOMAL PROTEIN S4