HL_4V6G_090

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6G_090 not in the Motif Atlas

Geometric match to HL_4C9D_002

Geometric discrepancy: 0.3834

The information below is about HL_4C9D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36488.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

4V6G|1|BA|C|2143
4V6G|1|BA|U|2144
4V6G|1|BA|C|2145
4V6G|1|BA|C|2146
4V6G|1|BA|G|2147
4V6G|1|BA|G|2148

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AN

30S RIBOSOMAL PROTEIN S11

Chain CA

Small subunit ribosomal RNA; SSU rRNA