HL_4V6G_144
3D structure
- PDB id
- 4V6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of 70S ribosome with two tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6G_144 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.1685
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
4V6G|1|CB|G|32
4V6G|1|CB|C|33
4V6G|1|CB|U|34
4V6G|1|CB|C|35
4V6G|1|CB|A|36
4V6G|1|CB|U|37
4V6G|1|CB|A|38
4V6G|1|CB|A|39
4V6G|1|CB|C|40
Current chains
- Chain CB
- TRNA FMET (UNMODIFIED BASES)
Nearby chains
- Chain C1
- MRNA
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CO
- 30S RIBOSOMAL PROTEIN S12
- Chain CP
- 30S RIBOSOMAL PROTEIN S13
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
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