HL_4V6G_151
3D structure
- PDB id
- 4V6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of 70S ribosome with two tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6G_151 not in the Motif Atlas
- Homologous match to HL_3TUP_003
- Geometric discrepancy: 0.2513
- The information below is about HL_3TUP_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
4V6G|1|CD|G|53
4V6G|1|CD|U|54
4V6G|1|CD|U|55
4V6G|1|CD|C|56
4V6G|1|CD|A|57
4V6G|1|CD|A|58
4V6G|1|CD|A|59
4V6G|1|CD|U|60
4V6G|1|CD|C|61
Current chains
- Chain CD
- TRNA FMET (UNMODIFIED BASES)
Nearby chains
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: