HL_4V6G_201

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6G_201 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.3615

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V6G|1|DA|C|1925
4V6G|1|DA|U|1926
4V6G|1|DA|A|1927
4V6G|1|DA|A|1928
4V6G|1|DA|G|1929

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA

Chain CC

Transfer RNA; tRNA