HL_4V7K_161

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4V7K|1|BA|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7K_161 not in the Motif Atlas

Homologous match to HL_7RQB_051

Geometric discrepancy: 0.4375

The information below is about HL_7RQB_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|BA|C|2143
4V7K|1|BA|U|2144
4V7K|1|BA|C|2145
4V7K|1|BA|C|2146
4V7K|1|BA|G|2147
4V7K|1|BA|G|2148

Current chains

Chain BA

RNA (2848-MER)

Nearby chains

Chain Aa

Small subunit ribosomal RNA; SSU rRNA

Chain Bk

30S ribosomal protein S11