HL_4V7K_206

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CCAGCGGUUCGGCCGG

Length

16 nucleotides

Bulged bases

4V7K|1|Ba|U|1136, 4V7K|1|Ba|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|Ba|C|1128
4V7K|1|Ba|C|1129
4V7K|1|Ba|A|1130
4V7K|1|Ba|G|1131
4V7K|1|Ba|C|1132
4V7K|1|Ba|G|1133
4V7K|1|Ba|G|1134
4V7K|1|Ba|U|1135
4V7K|1|Ba|U|1136
4V7K|1|Ba|C|1137
4V7K|1|Ba|G|1138
4V7K|1|Ba|G|1139
4V7K|1|Ba|C|1140
4V7K|1|Ba|C|1141
4V7K|1|Ba|G|1142
4V7K|1|Ba|G|1143

Current chains

Chain Ba

RNA (1504-MER)

Nearby chains

Chain Bi

30S ribosomal protein S9